TAPIR- target prediction for plant microRNAs | Tool name | TAPIR- target prediction for plant microRNAs |
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| URL | http://bioinformatics.psb.ugent.be/webtools/tapir |
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| Important features | Bioinformatic tool for determining plant microRNA targets. |
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| Citations | Bonnet E, He Y, Billiau K, Van de Peer Y. TAPIR, a web server for the
prediction of plant microRNA targets, including target mimics. Bioinformatics.
2010 Jun 15;26(12):1566-8. Epub 2010 Apr 28. PubMed PMID: 20430753.
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| Year of publication | 2010 |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | SPECIES: plant, http://bioinformatics.psb.ugent.be/webtools/tapir, Bioinformatic tool for determining plant microRNA targets. , Bonnet E- He Y- Billiau K- Van de Peer Y. TAPIR- a web server for the
prediction of plant microRNA targets- including target mimics. Bioinformatics.
2010 Jun 15;26(12):1566-8. Epub 2010 Apr 28. PubMed PMID: 20430753.
, 2010, 100, Online, I. SPECIES SUPPORTED INCLUDE: plant II. QUERY OR INPUT DATA : 1. Choose from three options:fast- precise- manual. 2. Enter or upload microRNA sequence and target sequence in FASTA format.3. Select score- free energy ratio. III. OUTPUT DATA: details on microRNA target predictions such as score- mfe ratio- seed gap- seed mismatch etc.- with diagrammatic representation of the results. |
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